Package: permRand 1.0.0
Michelle Mellers
permRand: Permutation Randomization
The package provides randomization using permutation for applications. To provide a Quality Control check, QC samples can be randomized within strata. A second function allows for the ability to ”switch” samples to meet set requirements and perform a certain amount of minimization on these switches. The functions are flexible for users by specifying strata size and number of QC samples per strata. The randomization meets the following requirements • QC sample requirements: QC samples not adjacent, QC samples from same mother must follow certain patterns. • Matched sample sets must be within a single strata, and next to each other.
Authors:
permRand_1.0.0.tar.gz
permRand_1.0.0.zip(r-4.7-any)permRand_1.0.0.zip(r-4.6-any)permRand_1.0.0.zip(r-4.5-any)
permRand_1.0.0.tgz(r-4.6-any)permRand_1.0.0.tgz(r-4.5-any)
permRand_1.0.0.tar.gz(r-4.7-any)permRand_1.0.0.tar.gz(r-4.6-any)
permRand_1.0.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION
card.svg |card.png
permRand/json (API)
| # Install 'permRand' in R: |
| install.packages('permRand', repos = c('https://m-mellers.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/m-mellers/permrand/issues
Last updated from:1d6d45e23b. Checks:8 ERROR, 1 OK. Indexed: yes.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| linux-devel | ERROR | 163 | ||
| source / vignettes | ERROR | 198 | ||
| linux-release | ERROR | 147 | ||
| macos-release | ERROR | 162 | ||
| macos-oldrel | ERROR | 116 | ||
| windows-devel | ERROR | 61 | ||
| windows-release | ERROR | 78 | ||
| windows-oldrel | ERROR | 58 | ||
| wasm-release | OK | 119 |
Exports:allRandbatchCountcountQCformatRandorderCasesoutputLabrandTestswitchRtestCCAcrosstestPairtestQCmatchtestRanduniqueID
Dependencies:askpassbackportsbase64encbitbit64blobbroombslibcachemcallrcellrangerclicliprconflictedcpp11crayoncurldata.tableDBIdbplyrdigestdplyrdtplyrevaluatefarverfastmapfontawesomeforcatsfsgarglegenericsggplot2gluegoogledrivegooglesheets4gtablehavenhighrhmshtmltoolshttridsisobandjquerylibjsonliteknitrlabelinglifecyclelubridatemagrittrmemoisemimemodelropensslotelpillarpkgconfigprettyunitsprocessxprogresspspurrrR6raggrappdirsRColorBrewerreadrreadxlrematchrematch2reprexrlangrmarkdownrstudioapirvestS7sassscalesselectrstringistringrsyssystemfontstextshapingtibbletidyrtidyselecttidyversetimechangetinytextzdbutf8uuidvctrsviridisLitevroomwithrxfunxml2yaml
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Data Randomization | allRand |
| Tests the number in each batch. | batchCount |
| Number of QC in each batch. | countQC |
| Formats data | formatRand |
| Number of single group in sequence. | orderCases |
| Output labels. | outputLab |
| QC Identifiers | randTest |
| Switching Generating Function | switchR |
| Sample groups within batches | testCCAcross |
| Ensures complete sets. | testPair |
| Tests QC matches | testQCmatch |
| Test Dataset | testRand |
| Unique IDs | uniqueID |